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tyler
2026-08-25 14:04:41 -07:00
parent 2fa3188296
commit 83ab73a05a
3 changed files with 417 additions and 111 deletions
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main.py
+8 -7
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@@ -129,10 +129,10 @@ SECTIONS = [
"params": [
{"name": "SCI", "default": True, "type": bool, "advanced": False, "help": "Calculate and mark channels bad based on their Scalp Coupling Index. This metric calculates the quality of the connection between the optode and the scalp."},
{"name": "SCI_USE_HEART_RATE_BAND", "default": True, "type": bool, "depends_on": [{"parent_name": "SCI"}, {"parent_name": "HEART_RATE"}], "advanced": False, "help": "Adjust the SCI frequency band using the participant's estimated heart rate."},
{"name": "SCI_LOW_FREQ", "default": 0.7, "type": float, "depends_on": "SCI_USE_HEART_RATE_BAND", "depends_value": False,"advanced": True, "help": "Lower frequency cutoff for SCI bandpass filtering (Hz)."},
{"name": "SCI_HIGH_FREQ", "default": 1.5, "type": float, "depends_on": "SCI_USE_HEART_RATE_BAND", "depends_value": False, "advanced": True, "help": "Upper frequency cutoff for SCI bandpass filtering (Hz)."},
{"name": "SCI_LOW_FREQ", "default": 0.7, "type": float, "depends_on": "SCI_USE_HEART_RATE_BAND", "depends_value": False,"advanced": True, "help": "Lower frequency bound for the signal band used in SCI calculation (Hz)."},
{"name": "SCI_HIGH_FREQ", "default": 1.5, "type": float, "depends_on": "SCI_USE_HEART_RATE_BAND", "depends_value": False, "advanced": True, "help": "Lower frequency bound for the signal band used in SCI calculation (Hz)."},
{"name": "SCI_TIME_WINDOW", "default": 3, "type": int, "depends_on": "SCI", "advanced": False, "help": "Duration of each independent SCI calculation window in seconds."},
{"name": "SCI_THRESHOLD", "default": 0.6, "type": float, "depends_on": "SCI", "advanced": False, "help": "SCI threshold on a scale of 0-1. Channels below this value are marked bad."},
{"name": "SCI_THRESHOLD", "default": 0.6, "type": float, "depends_on": "SCI", "advanced": False, "help": "SCI threshold on a scale of 0-1. Channels below this value will be marked bad."},
]
},
{
@@ -150,10 +150,11 @@ SECTIONS = [
"title": "Peak Spectral Power",
"params": [
{"name": "PSP", "default": True, "type": bool, "advanced": False, "help": "Calculate and mark channels bad based on their Peak Spectral Power. This metric calculates the amplitude or strength of the most prominent frequency component in a specified spectral range."},
{"name": "PSP_TIME_WINDOW", "default": 3, "type": int, "depends_on": "PSP", "advanced": False, "help": "Length of each independent PSP calculation window in seconds."},
{"name": "PSP_THRESHOLD", "default": 0.1, "type": float, "depends_on": "PSP", "advanced": False, "help": "Channels with average PSP values below this threshold will be marked as bad."},
{"name": "PSP_LOW_FREQ", "default": 0.7, "type": float, "depends_on": "PSP", "advanced": True, "help": "Lower frequency cutoff for PSP bandpass filtering (Hz)."},
{"name": "PSP_HIGH_FREQ", "default": 1.5, "type": float, "depends_on": "PSP", "advanced": True, "help": "Upper frequency cutoff for PSP bandpass filtering (Hz)."},
{"name": "PSP_USE_HEART_RATE_BAND", "default": True, "type": bool, "depends_on": [{"parent_name": "PSP"}, {"parent_name": "HEART_RATE"}], "advanced": False, "help": "Adjust the PSP frequency band using the participant's estimated heart rate."},
{"name": "PSP_LOW_FREQ", "default": 0.7, "type": float, "depends_on": "PSP", "advanced": True, "help": "Lower frequency bound for the signal band used in PSP calculation (Hz)."},
{"name": "PSP_HIGH_FREQ", "default": 1.5, "type": float, "depends_on": "PSP", "advanced": True, "help": "Upper frequency bound for the signal band used in PSP calculation (Hz)."},
{"name": "PSP_TIME_WINDOW", "default": 3, "type": int, "depends_on": "PSP", "advanced": False, "help": "Duration of each independent PSP calculation window in seconds."},
{"name": "PSP_THRESHOLD", "default": 0.1, "type": float, "depends_on": "PSP", "advanced": False, "help": "PSP threshold on a scale of 0-1. Channels below this value will be marked bad."},
]
},
{