12 Commits
v1.1.3 ... main

Author SHA1 Message Date
473c945563 fix for desktop windows 2025-11-30 15:42:56 -08:00
64ed6d2e87 more parameters 2025-11-03 16:56:05 -08:00
1aa2402d09 updates to hr 2025-10-31 21:21:10 -07:00
45c6176dba quick bug fixes 2025-10-21 18:05:30 -07:00
a4bbdb90c8 update to changelog for build 1.1.5 2025-10-20 16:08:34 -07:00
953ea90c67 fix to bandpass filter 2025-10-20 16:07:18 -07:00
20b255321b improvements 2025-10-20 09:33:50 -07:00
b5afcec37d fixes to cross platform saves 2025-10-15 17:09:51 -07:00
5361f6ea21 changed the changelog 2025-10-15 16:12:51 -07:00
ee023c26c1 changelog fix 2025-10-15 16:10:48 -07:00
06c9ff0ecf update changelog 2025-10-15 15:59:26 -07:00
542dd85a78 general fixes 2025-10-15 15:51:02 -07:00
5 changed files with 1519 additions and 264 deletions

View File

@@ -1,3 +1,54 @@
# Version 1.1.7
- Fixed a bug where having both a L_FREQ and H_FREQ would cause only the L_FREQ to be used
- Changed the default H_FREQ from 0.7 to 0.3
- Added a PSD graph, along with 2 heart rate images to the individual participant viewer
- The PSD graph is used to help calculate the heart rate, whereas the other 2 are currently just for show
- SCI is now done using a .6hz window around the calculated heart rate compared to a window around an average heart rate
- Fixed an issue with some epochs figures not showing under the participant analysis
- Removed SECONDS_TO_STRIP from the preprocessing options
- Added new parameters to the right side of the screen
- These parameters include TRIM, SECONDS_TO_KEEP, OPTODE_PLACEMENT, HEART_RATE, WAVELET, IQR, WAVELET_TYPE, WAVELET_LEVEL, ENHANCE_NEGATIVE_CORRELATION, SHORT_CHANNEL_THRESH, LONG_CHANNEL_THRESH, and DRIFT_MODEL
- Changed number of rectangles in the progress bar to 25 to account for the new options
# Version 1.1.6
- Fixed Process button from appearing when no files are selected
- Fixed a bug that would cause an instant child process crash on Windows
- Added L_FREQ and H_FREQ parameters for more user control over low and high pass filtering
# Version 1.1.5
- Fixed Windows saves not being able to be opened by a Mac (hopefully the other way too!)
- Added the option to right click loaded snirf files to reveal them in a file browser or delete them if they are no longer desired
- Changed the way folders are opened to store the files seperately rather than the folder as a whole to allow for the removal of files
- Fixed issues with dropdowns and bubbles not populating correctly when opening a single file and temporarily removed the option to open multiple folders
- Improved crash handling and the message that is displayed to the user if the application crashes
- Progress bar will now colour the stage that fails as red if a file fails during processing
- A warning message will be displayed when a file fails to process with information on what went wrong. This message does not halt the rest of the processing of the other files
- Fixed the number of rectangles in the progress bar to 20 (was incorrect in v1.1.1)
- Added validation to ensure loaded files do not have 2 dimensional data when clicking process to prevent inaccurate results from being generated
- Added more metadata information to the top left information panel
- Changed the Status Bar message when processing is complete to state how many were successful and how many were not
- Added a clickable link below the selected file's metadata explaining the independent parameters and why they are useful
- Updated some tooltips to provide better, more accurate information
- Added details about the processing steps and their order into the user guide
- Changed the default bandpass filtering parameters
# Version 1.1.4
- Fixed some display text to now display the correct information
- A new option under Analysis has been added to export the data from a specified participant as a csv file. Fixes [Issue 19](https://git.research.dezeeuw.ca/tyler/flares/issues/19), [Issue 27](https://git.research.dezeeuw.ca/tyler/flares/issues/27)
- Added 2 new parameters - TIME_WINDOW_START and TIME_WINDOW_END. Fixes [Issue 29](https://git.research.dezeeuw.ca/tyler/flares/issues/29)
- These parameters affect the visualization of the significance and contrast images but do not change the total time modeled underneath
- Fixed the duration of annotations edited from a BORIS file from 0 seconds to their proper duration
- Added the annotation information to each participant under their "File information" window
- Fixed Macs not being able to save snirfs attempting to be updated from BORIS files, and in general the updated files not respecting the path chosen by the user
# Version 1.1.3 # Version 1.1.3
- Added back the ability to use the fOLD dataset. Fixes [Issue 23](https://git.research.dezeeuw.ca/tyler/flares/issues/23) - Added back the ability to use the fOLD dataset. Fixes [Issue 23](https://git.research.dezeeuw.ca/tyler/flares/issues/23)
@@ -9,6 +60,7 @@
- Added a terminal to interact with the app in a more command-like form - Added a terminal to interact with the app in a more command-like form
- Currently the terminal has no functionality but some features for batch operations will be coming soon! - Currently the terminal has no functionality but some features for batch operations will be coming soon!
- Inter-Group viewer now has the option to visualize the average response on the brain of all participants in the group. Fixes [Issue 26](https://git.research.dezeeuw.ca/tyler/flares/issues/24) - Inter-Group viewer now has the option to visualize the average response on the brain of all participants in the group. Fixes [Issue 26](https://git.research.dezeeuw.ca/tyler/flares/issues/24)
- Fixed the description under "Update events in snirf file..."
# Version 1.1.2 # Version 1.1.2

790
flares.py

File diff suppressed because it is too large Load Diff

View File

@@ -0,0 +1 @@
<svg xmlns="http://www.w3.org/2000/svg" height="24px" viewBox="0 -960 960 960" width="24px" fill="#1f1f1f"><path d="M160-160q-33 0-56.5-23.5T80-240v-480q0-33 23.5-56.5T160-800h240l80 80h320q33 0 56.5 23.5T880-640v242q-18-14-38-23t-42-19v-200H447l-80-80H160v480h120v80H160ZM640-40q-91 0-168-48T360-220q35-84 112-132t168-48q91 0 168 48t112 132q-35 84-112 132T640-40Zm0-80q57 0 107.5-26t82.5-74q-32-48-82.5-74T640-320q-57 0-107.5 26T450-220q32 48 82.5 74T640-120Zm0-40q-25 0-42.5-17.5T580-220q0-25 17.5-42.5T640-280q25 0 42.5 17.5T700-220q0 25-17.5 42.5T640-160Zm-480-80v-480 277-37 240Z"/></svg>

After

Width:  |  Height:  |  Size: 593 B

View File

@@ -0,0 +1 @@
<svg xmlns="http://www.w3.org/2000/svg" height="24px" viewBox="0 -960 960 960" width="24px" fill="#1f1f1f"><path d="M200-440v-80h560v80H200Z"/></svg>

After

Width:  |  Height:  |  Size: 149 B

921
main.py

File diff suppressed because it is too large Load Diff