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Update Processing & Analysis

tyler
2026-07-13 15:06:33 -07:00
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Processing-%26-Analysis.md
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# Processing # Processing
This page is dedicated to understanding how to process all loaded snirf files once all their individual and global parameters have been set. If you haven't already, visit the [Home Page](https://git.research.dezeeuw.ca/tyler/flares/wiki/Home) and the [Understanding Parameters](https://git.research.dezeeuw.ca/tyler/flares/wiki/Understanding-Parameters) page before following along with this guide, as this guide assumes you have an understanding of the applications layout and all parameters. This page is dedicated to understanding how to process all loaded snirf files once all their individual and global parameters have been set. If you haven't already, visit the [Home Page](https://git.research.dezeeuw.ca/tyler/flares/wiki/Home) and the [Understanding Parameters](https://git.research.dezeeuw.ca/tyler/flares/wiki/Understanding-Parameters) page before following along with this guide, as this guide assumes you have an understanding of the applications layout and all parameters.
Processing a file with FLARES is incredibly simple. To start, open a file or a folder from the Navigation Bar. Once the file/files have been loaded, ensure that all of the per-file and global parameters are correct for the study. Once you are satisfied with the parameters, simply click the Process button to start processing all the files. Once the Process button has been clicked, the button will switch to read Cancel. Pushing the Cancel button will halt the processing immediately. The number of files to be processed simultaneously is set by the MAX_WORKERS parameter. Processing a file with FLARES is incredibly simple. To start, open a file or a folder from the Navigation Bar. Once the file/files have been loaded, ensure that all of the per-file and global parameters are correct for the study. Once you are satisfied with the parameters, simply click the Process button to start processing all the files. Once the Process button has been clicked, the button will switch to read Cancel. Pushing the Cancel button will halt the processing immediately. The number of files to be processed simultaneously is set by the MAX_WORKERS parameter.
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The processing will finish shortly after all progress bars have completed. The Status Bar will confirm once all processing has completed, among with the Analysis button becoming visible. If the processing completes and a progress bar has not finished, then something went wrong processing that file. Checking the application logs could provide insight into what went wrong. The processing will finish shortly after all progress bars have completed. The Status Bar will confirm once all processing has completed, among with the Analysis button becoming visible. If the processing completes and a progress bar has not finished, then something went wrong processing that file. Checking the application logs could provide insight into what went wrong.
# Analysis # Analysis
Once the processing has completed and the Analysis button has been clicked, a popup window will appear. This popup window will contain different options for analysing the data. Due to the length of describing each option, each of them will have their own Wiki page explaining them. Below is the list of the options:
Once the processing has completed and the Analysis button has been clicked, a popup window will appear - Open Participant Viewer
- Open Participant Brain Viewer
- Open Participant Fold Channels Viewer
- Open Functional Connectivity Viewer
- Open Group Functional Connectivity Viewer
- Open Inter-Group Viewer
- Open Cross Group Brain Viewer
- Open Export Data As CSV Viewer
# What's Next
Congratulations! You now should understand how to process snirf files and how to open the windows that contain the processed data to perform your analysis on. See one of the Wiki pages above to continue your journey.